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Max Planck Institute for Neurobiology of Behavior - caesar

Welcome to the MPINB GitHub page

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  1. msemalign msemalign Public

    serial section multibeam scanning electron microscopy volume alignment

    Python 5 1

  2. in_silico_framework in_silico_framework Public

    An in silico framework for multi-scale modeling and analysis of in vivo neuron-network mechanisms

    Python 3 1

  3. gauss-em gauss-em Public

    Example that demonstrates computationally solving the order of unordered serial slices

    Jupyter Notebook 1

  4. swarm-scripts swarm-scripts Public

    scripts for a basic method of scaling on a SLURM HPC cluster

    Python 1

  5. ffn ffn Public

    Forked from google/ffn

    Flood-Filling Networks for instance segmentation in 3d volumes.

    Python

  6. rcc-xcorr rcc-xcorr Public

    A Python library to compute normalized 2D cross-correlation of images using GPU and multiprocessing.

    Jupyter Notebook

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