8000 Memorial Sloan Kettering · GitHub
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content
@mskcc

Memorial Sloan Kettering

Pinned Loading

  1. vcf2maf vcf2maf Public

    Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

    Perl 386 219

  2. facets facets Public

    Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

    R 150 67

  3. ngs-filters ngs-filters Public

    Filters for false-positive mutation calls in NGS

    R 30 21

  4. iCallSV iCallSV Public

    Forked from rhshah/iCallSV

    A Framework to call Structural Variants from NGS based datasets

    Python 3 1

  5. mutation-signatures mutation-signatures Public

    Create mutation signatures from MAF's, and decompose them into Stratton signatures

    R 60 30

Repositories

Showing 10 of 236 repositories
  • igo-demux Public

    Demultiplex Illumina sequencer output via DRAGEN, create fastq files and launch pipelines

    mskcc/igo-demux’s past year of commit activity
    Python 6 Apache-2.0 0 4 1 Updated May 9, 2025
  • smile-server Public
    mskcc/smile-server’s past year of commit activity
    Java 2 4 57 0 Updated May 9, 2025
  • smile-dashboard Public
    mskcc/smile-dashboard’s past year of commit activity
    TypeScript 0 AGPL-3.0 8 0 0 Updated May 9, 2025
  • forte Public

    Functional Observation of RNA Transcriptome Elements/Expression

    mskcc/forte’s past year of commit activity
    Nextflow 8 MIT 1 26 6 Updated May 9, 2025
  • igo-lims-plugins Public

    Sapio LIMS customizations to workflows for IGO

    mskcc/igo-lims-plugins’s past year of commit activity
    Java 2 0 1 8 Updated May 8, 2025
  • igo-run-qc-node Public
    mskcc/igo-run-qc-node’s past year of commit activity
    JavaScript 0 0 0 1 Updated May 8, 2025
  • ccs_cohort_utils Public
    mskcc/ccs_cohort_utils’s past year of commit activity
    Python 0 0 0 0 Updated May 8, 2025
  • ridgeback Public

    Toil API

    mskcc/ridgeback’s past year of commit activity
    Python 1 Apache-2.0 2 38 5 Updated May 7, 2025
  • igo-genomics Public
    mskcc/igo-genomics’s past year of commit activity
    Vue 1 0 3 0 Updated May 7, 2025
  • argos-qc Public

    Repo for ARGOS QC workflow in CWL

    mskcc/argos-qc’s past year of commit activity
    Common Workflow Language 0 0 0 0 Updated May 7, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…
0