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Replace download_reference.py with NCBI Datasets API implementation (removes assembly_summary_refseq.txt dependency) nf-core CI #499: Pull request #249 synchronize by Daniel-VM
July 2, 2025 11:46 50m 23s Daniel-VM:kmerfinder_apidownload_ncbi
Daniel-VM:kmerfinder_apidownload_ncbi
July 2, 2025 11:46 50m 23s
Replace download_reference.py with NCBI Datasets API implementation (removes assembly_summary_refseq.txt dependency) nf-core CI #498: Pull request #249 opened by Daniel-VM
July 2, 2025 11:37 9m 27s Daniel-VM:kmerfinder_apidownload_ncbi
Daniel-VM:kmerfinder_apidownload_ncbi
July 2, 2025 11:37 9m 27s
Fix KmerFinder DB and relative paths resolution issues nf-core CI #497: Pull request #231 synchronize by Daniel-VM
July 2, 2025 08:53 39m 26s Daniel-VM:dev
Daniel-VM:dev
July 2, 2025 08:53 39m 26s
Fix CAT_FASTQ handling for long reads and hybrid assembly modes nf-core CI #496: Pull request #248 synchronize by Daniel-VM
July 1, 2025 11:32 40m 44s Daniel-VM:fix_catfastq_longreads
Daniel-VM:fix_catfastq_longreads
July 1, 2025 11:32 40m 44s
Fix CAT_FASTQ handling for long reads and hybrid assembly modes nf-core CI #495: Pull request #248 opened by Daniel-VM
July 1, 2025 11:30 3m 1s Daniel-VM:fix_catfastq_longreads
Daniel-VM:fix_catfastq_longreads
July 1, 2025 11:30 3m 1s
Update modules: unicycler (to 0.5.1) and dragonflye (to 1.2.1) nf-core CI #494: Pull request #247 synchronize by nf-core-bot
June 26, 2025 10:03 36m 28s Daniel-VM:update_modules
Daniel-VM:update_modules
June 26, 2025 10:03 36m 28s
Update modules: unicycler (to 0.5.1) and dragonflye (to 1.2.1) nf-core CI #493: Pull request #247 synchronize by Daniel-VM
June 26, 2025 07:33 40m 39s Daniel-VM:update_modules
Daniel-VM:update_modules
June 26, 2025 07:33 40m 39s
Update modules: unicycler (to 0.5.1) and dragonflye (to 1.2.1) nf-core CI #492: Pull request #247 opened by Daniel-VM
June 25, 2025 14:37 49m 55s Daniel-VM:update_modules
Daniel-VM:update_modules
June 25, 2025 14:37 49m 55s
Fix KmerFinder DB and relative paths resolution issues nf-core CI #491: Pull request #231 synchronize by Daniel-VM
June 24, 2025 09:47 39m 15s Daniel-VM:dev
Daniel-VM:dev
June 24, 2025 09:47 39m 15s
Merge pull request #241 from HaidYi/dev nf-core CI #490: Commit 1cb3425 pushed by lpantano
May 19, 2025 14:31 49m 14s dev
dev
May 19, 2025 14:31 49m 14s
Add the Liftoff module nf-core CI #489: Pull request #241 synchronize by lpantano
May 17, 2025 16:59 49m 37s HaidYi:dev
HaidYi:dev
May 17, 2025 16:59 49m 37s
Add the Liftoff module nf-core CI #488: Pull request #241 synchronize by lpantano
May 17, 2025 16:48 12m 1s HaidYi:dev
HaidYi:dev
May 17, 2025 16:48 12m 1s
Merge pull request #239 from nf-core/add_prokka_protein nf-core CI #487: Commit e51f39e pushed by lpantano
May 16, 2025 20:19 50m 16s dev
dev
May 16, 2025 20:19 50m 16s
Add prokka protein nf-core CI #486: Pull request #239 synchronize by lpantano
May 16, 2025 13:44 47m 30s add_prokka_protein
add_prokka_protein
May 16, 2025 13:44 47m 30s
Add the Liftoff module nf-core CI #484: Pull request #241 opened by HaidYi
May 14, 2025 20:17 50m 27s HaidYi:dev
HaidYi:dev
May 14, 2025 20:17 50m 27s
added longreads CAT_FASTQ call using same logic as shortreads call nf-core CI #483: Pull request #240 opened by alextrouerntrend
May 14, 2025 19:55 4m 20s alextrouerntrend:fix/230
alextrouerntrend:fix/230
May 14, 2025 19:55 4m 20s
Add prokka protein nf-core CI #482: Pull request #239 synchronize by lpantano
May 14, 2025 18:41 53m 47s add_prokka_protein
add_prokka_protein
May 14, 2025 18:41 53m 47s
Add prokka protein nf-core CI #481: Pull request #239 opened by lpantano
May 14, 2025 18:22 19m 21s add_prokka_protein
add_prokka_protein
May 14, 2025 18:22 19m 21s
Merge pull request #232 from nf-core/nf-core-template-merge-3.2.1 nf-core CI #479: Commit 9239b6c pushed by lpantano
May 13, 2025 20:18 46m 50s dev
dev
May 13, 2025 20:18 46m 50s
Important! Template update for nf-core/tools v3.2.1 nf-core CI #478: Pull request #232 synchronize by lpantano
May 13, 2025 20:09 50m 17s nf-core-template-merge-3.2.1
nf-core-template-merge-3.2.1
May 13, 2025 20:09 50m 17s
Important! Template update for nf-core/tools v3.2.1 nf-core CI #477: Pull request #232 synchronize by lpantano
May 13, 2025 19:37 32m 43s nf-core-template-merge-3.2.1
nf-core-template-merge-3.2.1
May 13, 2025 19:37 32m 43s
Merge pull request #238 from stjudecab/ToullingQC nf-core CI #476: Commit a488a5d pushed by lpantano
May 13, 2025 19:19 49m 8s dev
dev
May 13, 2025 19:19 49m 8s
Important! Template update for nf-core/tools v3.2.1 nf-core CI #475: Pull request #232 synchronize by lpantano
May 13, 2025 18:50 47m 1s nf-core-template-merge-3.2.1
nf-core-template-merge-3.2.1
May 13, 2025 18:50 47m 1s
Important! Template update for nf-core/tools v3.2.1 nf-core CI #474: Pull request #232 synchronize by lpantano
May 13, 2025 18:46 4m 36s nf-core-template-merge-3.2.1
nf-core-template-merge-3.2.1
May 13, 2025 18:46 4m 36s
Important! Template update for nf-core/tools v3.2.1 nf-core CI #473: Pull request #232 synchronize by lpantano
May 13, 2025 18:46 42s nf-core-template-merge-3.2.1
nf-core-template-merge-3.2.1
May 13, 2025 18:46 42s
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