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MHCquant 3.0.0 - Monrepos

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@jonasscheid jonasscheid released this 22 May 20:10
3.0.0
4e0dd55
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Learn about vigilant mode.

Added

  • Added PYOPENMS_CHROMATOGRAMEXTRACTOR extracting MS1 Chromatograms and visualize them in multiQC report #329
  • Added OPENMS_IDMASSACCURACY and DATAMASH_HISTOGRAM to compute fragment mass errors and visualizte them in multiQC report #332
  • Added global fdr evaluation in new local subworkflow RESCORE #338
  • Added -weights parameter in OPENMS_PERCOLATORADAPTER and visualize the median feature weights in multiQC report #347
  • Added flag --generate_speclib that will generate a spectrum library for DIA searches with EasyPQP #349
  • Replace local with nf-core modules #350
  • Added support for CCS-based rescoring with IM2Deep feature generator #358
  • Added multiple plots to MultiQC report by @JuliaGraf #361
  • Added ability to reduce output columns by @JuliaGraf #361 (BREAKING)

Dependencies

Dependency Old version New version
MultiQC 1.21.0 1.28.0
MS2Rescore 3.0.1 3.1.5
Nf-core 2.14.1 3.2.1
OpenMS 3.1.0 3.4.0
Thermorawfileparser 1.4.3 1.4.5

Contributors

JuliaGraf
Assets 2
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