8000 Issues · nf-core/variantbenchmarking · GitHub
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22 Open 74 Closed
22 Open 74 Closed
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Issues list

supply happy comparisons table enhancement New feature or request
#196 opened May 6, 2025 by kubranarci
1
regions.csv file is not being merged bug Something isn't working
#187 opened Apr 17, 2025 by kubranarci
SEQC2 test fails for rtgtools as malformatted INFO field in the truth bug Something isn't working
#186 opened Apr 17, 2025 by kubranarci
1
integrate sarek results
#185 opened Apr 17, 2025 by kubranarci
igv-reports backlog enhancement New feature or request
#184 opened Apr 16, 2025 by kubranarci
add total stats for happy merging snps and indels backlog enhancement New feature or request
#183 opened Apr 16, 2025 by kubranarci
add indel distribution plot for SVs enhancement New feature or request
#182 opened Apr 16, 2025 by kubranarci
add upset plot for TP/FP/FN numbers enhancement New feature or request
#181 opened Apr 7, 2025 by kubranarci
improve plots/statistics
#180 opened Apr 7, 2025 by kubranarci
Concordance test between VCFs enhancement New feature or request
#178 opened Apr 3, 2025 by kjellinjonas
metrics plot does not take variants as int bug Something isn't working
#177 opened Apr 1, 2025 by kubranarci
Use svtk standardize to standardize SVs enhancement New feature or request
#162 opened Mar 5, 2025 by kubranarci
1
vt decompose_blocksub enhancement New feature or request
#114 opened Dec 2, 2024 by kubranarci
add truth files into igenome enhancement New feature or request
#104 opened Nov 7, 2024 by kubranarci
@kubranarci
Add an test case for rat backlog enhancement New feature or request low priority not urgent
#102 opened Oct 30, 2024 by kubranarci
@3nrique0 @kubranarci
2
somatic workflow
#96 opened Oct 22, 2024 by kubranarci
generate somatic test files for COLO-829 backlog enhancement New feature or request not urgent
#93 opened Oct 22, 2024 by kubranarci
oncoliner assessment tool enhancement New feature or request not urgent
#92 opened Oct 14, 2024 by kubranarci
add oncoliner tools enhancement New feature or request not urgent
#89 opened Sep 25, 2024 by kubranarci
@kubranarci
support for trio analysis for mendelian inheritance errors backlog enhancement New feature or request
#82 opened Aug 16, 2024 by kubranarci
coverage stratification backlog enhancement New feature or request
#65 opened Jul 15, 2024 by kubranarci
wittyer bug bug Something isn't working documentation Improvements or additions to documentation low priority wontfix This will not be worked on
#59 opened Jul 4, 2024 by kubranarci
@kubranarci
2
ProTip! Updated in the last three days: updated:>2025-05-08.
0