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Materials for Analyzing Next-Generation Sequencing (ANGUS) course.

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Name		Name	Last commit message	Last commit date
Latest commit History 278 Commits
.idea		.idea
_static		_static
_templates		_templates
amazon		amazon
figures		figures
files		files
.DS_Store		.DS_Store
.gitignore		.gitignore
IntroductionControlFlowR.md		IntroductionControlFlowR.md
IntroductionControlFlowR.rst		IntroductionControlFlowR.rst
MacManes_tutorial.md		MacManes_tutorial.md
Makefile		Makefile
README.md		README.md
R_Introductory_tutorial_2014.md		R_Introductory_tutorial_2014.md
R_Introductory_tutorial_2014.rst		R_Introductory_tutorial_2014.rst
R_Introductory_tutorial_2015.md		R_Introductory_tutorial_2015.md
Read_&_munge_NGS_tutorial.R		Read_&_munge_NGS_tutorial.R
SOAPdeNovoTrans_count_eXpress.rst		SOAPdeNovoTrans_count_eXpress.rst
analyzing_drosophila_htseq.rst		analyzing_drosophila_htseq.rst
assembling-ecoli-with-velvet.rst		assembling-ecoli-with-velvet.rst
code-of-conduct.rst		code-of-conduct.rst
conf.py		conf.py
day1.rst		day1.rst
day2.rst		day2.rst
drosophila_htseq.R		drosophila_htseq.R
drosophila_rnaseq1.rst		drosophila_rnaseq1.rst
drosophila_rnaseq_bwa_htseq.rst		drosophila_rnaseq_bwa_htseq.rst
eel-pond.rst		eel-pond.rst
genome-comparison-and-phylogeny.rst		genome-comparison-and-phylogeny.rst
genome_tophat_htseq_counts.zip		genome_tophat_htseq_counts.zip
git-koans.rst		git-koans.rst
howe-mgrast.rst		howe-mgrast.rst
howe-ncbi.rst		howe-ncbi.rst
index.rst		index.rst
instructors-guide.rst		instructors-guide.rst
interval-analysis-and-visualization.rst		interval-analysis-and-visualization.rst
kmers-etc.rst		kmers-etc.rst
long-read.rst		long-read.rst
mount_chris_snapshot.rst		mount_chris_snapshot.rst
rnaseq_mapping_to_transcritome_bwa_htseq_counts.tar.gz		rnaseq_mapping_to_transcritome_bwa_htseq_counts.tar.gz
running-command-line-blast.rst		running-command-line-blast.rst
sam-format-tutorial.rst		sam-format-tutorial.rst
short-read-quality-evaluation-ctb.rst		short-read-quality-evaluation-ctb.rst
short-read-quality-evaluation.rst		short-read-quality-evaluation.rst
variant.rst		variant.rst
vcf_exploration.md		vcf_exploration.md
vcf_exploration.rst		vcf_exploration.rst