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Mamba-Sea

Mamba-Sea: A Mamba-based Framework with Global-to-Local Sequence Augmentation for Generalizable Medical Image Segmentation

Mamba-Sea has been accepted by IEEE TMI on April 23, 2025. 【Paper

Kind Tips

The core part of Mamba-Sea's code is in Network1 and Network2.By using these two files as a backbone, you can easily incorporate our code into your tasks. The complete part of our code will soon be released by May 2025.

Prepare Datasets

  • './dataset/fundus/' or './dataset/ProstateSlice/' or './dataset/skin/'

    -Domain1

    • train
      • images
        • .png
      • masks
        • .png
    • test
      • images
        • .png
      • masks
        • .png ......

Pre_trained Weights

The weights of the pre-trained VMamba could be downloaded Google Drive. After that, the pre-trained weights should be stored in './pretrained_weights/'.

Thanks a lot for the valuable work of VM-UNet and VMamba.

Dataset

Fundus

Download dataset Fundus (Provided by DoFE).

Prostate

Download dataset Prostate (Originally Provided by SAML and RAM-DSIR).

Skin

Download dataset ISIC2018 and PH2. (Following ESP-MedSAM).

Contact Information

Email: chengzihan@sjtu.edu.cn or czh@smail.nju.edu.cn, each one is OK.

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