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    6 repositories

    • proteingym_website

      Public
      JavaScript
      •1•1•0•0•Updated May 2, 2025May 2, 2025

    • ProteinGym

      Public
      Official repository for the ProteinGym benchmarks
      benchmarkcomputational-biologyproteinprotein-designprotein-fitness
      HTML
      •
      MIT License
      •40•308•9•1•Updated Apr 28, 2025Apr 28, 2025

    • ProteinNPT

      Public
      Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
      protein-design
      Python
      •
      MIT License
      •12•113•3•0•Updated Mar 15, 2025Mar 15, 2025

    • EVE

      Public
      Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.
      Python
      •
      MIT License
      •56•174•0•3•Updated Mar 16, 2024Mar 16, 2024

    • EVEscape

      Public
      Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
      Python
      •
      MIT License
      •10•59•2•1•Updated Oct 11, 2023Oct 11, 2023

    • Tranception

      Public
      Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
      Python
      •
      MIT License
      •27•153•5•1•Updated Aug 24, 2023Aug 24, 2023
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