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    4 repositories

    • ORI-marker-screen

      Public
      Software and Data for reproducible analysis for identifying functional origins in a pooled ORI-marker screen
      Jupyter Notebook
      •
      MIT License
      •1•4•1•0•Updated Jun 30, 2025Jun 30, 2025

    • MicrobeMod

      Public
      A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing
      Python
      •
      Other
      •1•49•9•0•Updated Jun 9, 2025Jun 9, 2025

    • GenomeSPOT

      Public
      Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome
      Jupyter Notebook
      •
      MIT License
      •3•55•8•0•Updated Mar 28, 2025Mar 28, 2025

    • LoopDB

      Public
      Contains a docker implementation of LoopDesigner
      CSS
      •
      MIT License
      •1•1•0•0•Updated May 4, 2022May 4, 2022
    0