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    127 repositories

    • fastMRI

      Public
      A large-scale dataset of both raw MRI measurements and clinical MRI images.
      Python
      •
      MIT License
      •396•0•0•0•Updated May 23, 2024May 23, 2024

    • torchxrayvision

      Public
      TorchXRayVision: A library of chest X-ray datasets and models.
      Jupyter Notebook
      •
      Apache License 2.0
      •233•0•0•0•Updated May 23, 2024May 23, 2024

    • platipy

      Public
      Processing Library and Analysis Toolkit for Medical Imaging in Python
      Python
      •
      Apache License 2.0
      •29•0•0•0•Updated May 23, 2024May 23, 2024

    • DBT-cancer-detection-algorithms

      Public
      Library of lesion detection algorithm codebases from the DBTex Digital Breast Tomosynthesis Lesion Detection Challenge
      2•0•0•0•Updated Apr 17, 2024Apr 17, 2024

    • DoseRTX

      Public
      Domain knowledge driven 3D radiation dose prediction [PMB'22]
      Python
      •9•0•0•0•Updated Feb 18, 2024Feb 18, 2024

    • hapi-fhir-opensrp-extensions

      Public
      This repository holds all the code extensions OpenSRP will build on top of the HAPI FHIR server.
      Java
      •
      Apache License 2.0
      •1•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • foundation-cancer-image-biomarker

      Public
      Code and evaluation repository for the paper
      Jupyter Notebook
      •
      MIT License
      •14•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • Kvasircapsule-SEG

      Public
      NanoNet: Real-Time Polyp Segmentation in Capsule Endoscopy & Colonoscopy [Contains an open-access capsule endoscopy dataset (2021 IEEE CBMS)]
      3•0•0•0•Updated Dec 2, 2023Dec 2, 2023

    • PNS-Net-polyp

      Public
      2021-MICCAI-Progressively Normalized Self-Attention Network for Video Polyp Segmentation
      Python
      •
      Apache License 2.0
      •29•0•0•0•Updated Dec 2, 2023Dec 2, 2023

    • VPS-video-polyp

      Public
      Video Polyp Segmentation: A Deep Learning Perspective (MIR 2022)
      Python
      •
      Apache License 2.0
      •31•0•0•0•Updated Dec 2, 2023Dec 2, 2023

  • Breast-Cancer-Detection-Mammogram-Deep-Learning

    Public
    Master's dissertation for breast cancer detection in mammograms using deep learning techniques. Contains source code and report used.
    TeX
    •
    BSD 2-Clause "Simplified" License
    •30•0•0•0•Updated Dec 2, 2023Dec 2, 2023

  • ColonSegNet

    Public
    ColonSegNet: Real-Time Polyp Segmentation (Used in NVIDIA Clara Holoscan App for Polyp Segmentation)
    Python
    •17•0•0•0•Updated Nov 27, 2023Nov 27, 2023

  • RibSeg

    Public
    [MICCAI'21] RibSeg Dataset and Strong Point Cloud Baselines for Rib Segmentation from CT Scans
    Python
    •
    Apache License 2.0
    •13•0•0•0•Updated Nov 27, 2023Nov 27, 2023

  • CAD_PE

    Public
    Python
    •
    Other
    •5•0•0•0•Updated Nov 27, 2023Nov 27, 2023

  • dicom-sr

    Public
    DICOM Structured Reports on FHIR implementation guide
    GLSL
    •4•0•0•0•Updated Nov 27, 2023Nov 27, 2023

  • sakai-react

    Public
    Free React Admin Template
    CSS
    •
    MIT License
    •595•0•0•0•Updated Nov 27, 2023Nov 27, 2023

  • MICCAI-OpenSourcePapers

    Public
    MICCAI 2020-2022 Open Source Papers
    Apache License 2.0
    •236•0•0•0•Updated Nov 10, 2023Nov 10, 2023

  • nnUNet

    Public
    Python
    •
    Apache License 2.0
    •2k•0•0•0•Updated Oct 9, 2023Oct 9, 2023

  • nnDetection

    Public
    nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.
    Python
    •
    Apache License 2.0
    •109•1•0•0•Updated Sep 29, 2023Sep 29, 2023

  • segment-anything-medical-evaluation

    Public
    Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
    Python
    •18•0•0•0•Updated Sep 29, 2023Sep 29, 2023

  • MedSAM

    Public
    The official repository for MedSAM: Segment Anything in Medical Images.
    Jupyter Notebook
    •
    Apache License 2.0
    •497•0•0•0•Updated Sep 29, 2023Sep 29, 2023

  • privateGPT

    Public
    Interact privately with your documents using the power of GPT, 100% privately, no data leaks
    Python
    •
    Apache License 2.0
    •7.5k•0•0•0•Updated Sep 1, 2023Sep 1, 2023

  • napari-sam

    Public
    Python
    •
    Apache License 2.0
    •31•0•0•0•Updated Aug 25, 2023Aug 25, 2023

  • Nvidia-DeepLearningExamples

    Public
    State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.
    Jupyter Notebook
    •3.3k•0•0•0•Updated Aug 25, 2023Aug 25, 2023

  • H2G-Net-breast-cancer-parthology

    Public
    ⚡ H2G-Net for Semantic Segmentation of Histopathological Images
    TeX
    •
    MIT License
    •7•0•0•0•Updated Jul 28, 2023Jul 28, 2023

  • CVA-Net

    Public
    Python
    •
    Other
    •9•0•0•0•Updated Jul 23, 2023Jul 23, 2023

  • novu

    Public
    The open-source notification infrastructure for products
    TypeScript
    •
    MIT License
    •4k•0•0•0•Updated Jul 23, 2023Jul 23, 2023

  • PathCNN

    Public
    Interpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma
    Python
    •9•0•0•0•Updated Jul 23, 2023Jul 23, 2023

  • DeepLearningExamples

    Public
    State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.
    Jupyter Notebook
    •3.3k•0•0•0•Updated Jun 12, 2023Jun 12, 2023

  • Niffler

    Public
    Niffler: A DICOM Framework for Machine Learning and Processing Pipelines.
    Python
    •
    BSD 3-Clause "New" or "Revised" License
    •55•0•0•0•Updated Jun 12, 2023Jun 12, 2023
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