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Join subcellular Visium HD bins into cells

Jupyter Notebook 98 7 Updated May 16, 2025
Jupyter Notebook 41 8 Updated Mar 23, 2025

Multi-subject Single Cell Deconvolution

R 260 109 Updated Mar 4, 2024

Support files for a data visualization course and book

R 192 533 Updated Jul 16, 2020

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

R 28 28 Updated Apr 16, 2025

Sparse multi-dimensional arrays for the PyData ecosystem

Python 632 132 Updated May 20, 2025

The Surprisingly ParalleL spArse Tensor Toolkit.

C 71 29 Updated Mar 3, 2022

A safer complement of R, the legendary programming language for statistic and datasciences !

Rust 52 Updated May 12, 2025

Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution

HTML 45 9 Updated May 3, 2023

Development for Bayesian Survival Models Package

R 19 3 Updated Feb 4, 2025

Simple examples of SGD-style computations in Julia

Julia 9 2 Updated Sep 13, 2012

This repository contains examples for RxInfer.jl

Makefile 22 9 Updated May 20, 2025

R Weekly

Rez 761 375 Updated May 23, 2025

Use SVG images as ggplot points

R 142 5 Updated Sep 11, 2024

Interface between R and CUDA using Rcpp.

HTML 2 Updated Apr 13, 2015

A skeleton R package that uses Rcpp, CUDA, and s4 classes. This is a learning exercise.

C++ 3 Updated Oct 27, 2020

High-performance sparse data representation and manipulation in R

C 9 3 Updated May 13, 2025

Rcpp meets Thrust

C++ 4 2 Updated Jan 11, 2018

[CIBM 2024] Segment Anything Model for Medical Image Segmentation: Open-Source Project Summary

937 69 Updated May 21, 2025

RAFT contains fundamental widely-used algorithms and primitives for machine learning and information retrieval. The algorithms are CUDA-accelerated and form building blocks for more easily writing …

Cuda 886 206 Updated May 22, 2025

A Julia wrapper for TensorFlow

Julia 884 110 Updated Apr 30, 2024

Distributed NMF/NTF Library

C++ 46 19 Updated Dec 11, 2024
C++ 6 1 Updated May 23, 2025

R package for integrating and analyzing multiple single-cell datasets

R 413 80 Updated May 4, 2025

❗ This is a read-only mirror of the CRAN R package repository. Matrix — Sparse and Dense Matrix Classes and Methods. Homepage: https://Matrix.R-forge.R-project.org Report bugs for this package: htt…

C 21 25 Updated Mar 11, 2025

Symbolic Mathematics in Julia

Jupyter Notebook 4 Updated Feb 18, 2025

DuckDB extension to read files within zip archives.

C++ 33 4 Updated May 21, 2025

Tools for ggplot2 scales

R 429 114 Updated Apr 24, 2025

❗ This is a read-only mirror of the CRAN R package repository. dlm — Bayesian and Likelihood Analysis of Dynamic Linear Models

C 9 9 Updated Sep 22, 2024

Dynamic, adaptive sampling during nanopore sequencing

Python 32 2E24 7 Updated May 10, 2025
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