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alabaster.sfe Public
Forked from pachterlab/alabaster.sfeLanguage agnostic on disk representation of SFE objects
R Other UpdatedNov 14, 2024 -
voyager Public
Forked from pachterlab/voyagerFrom geospatial to spatial -omics
R Artistic License 2.0 UpdatedOct 25, 2024 -
SpatialFeatureExperiment Public
Forked from pachterlab/SpatialFeatureExperimentExtension of SpatialExperiment with sf
R Artistic License 2.0 UpdatedOct 25, 2024 -
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seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
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RESOLVE_tools Public
Forked from MicheleBortol/RESOLVE_toolsTentative set of tools and scripts for analysing spatial transcriptomic data with the resolve platform
R UpdatedAug 24, 2022 -
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make3dOrganoid Public
reconstruct 3D organoid models from 2D bright field images using R
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xfuse_heartVisium Public
Deep Learning tool - xfuse - on 10X Visium heart (public dataset)
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registSurAuto3d Public
It's an open-source method using different R libraries. Useful for 3D phenotypic quantification and morphometric analysis.
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