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University of Maryland School of Medicine
- Baltimore, MD
- https://orcid.org/0000-0002-0593-3569
- @jabaron_phd
- in/allenbaron
Lists (8)
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Assess Use
List of repositories useful (or that might be useful) for assessing resource use in scientific literature.DO Development
Repos contributing to development of the Human Disease Ontology and its website disease-ontology.org.DO imports
DO Users
List of repositories that use the Human Disease Ontology.Ontologies
Ontology Development
List of repos for ontology development, maintenance, and improvement.Programming Tools
R Packages
R packages I want to keep an eye onStars
An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
System requirements for R packages
Simple Makefile template for documenting frequent commands.
🐨 Make a subset of ORCID available as an OWL ontology
An open source gazetteer constructed on ontological principles
A library for creating complex UpSet plots with ggplot2 geoms
The source code of Infectious Disease Ontology (IDO)
Repository for representing genotypes and their association with phenotypes
Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.
Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds.
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Ontology for the description of human clinical features
Customizable translation of OBO graphs to dot for visualization using graphviz and other tools
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Markdown Cheatsheet for Github Readme.md
Update (i.e. commit and push) files on GitHub