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Starred repositories
iSteve-O / Duolingo
Forked from KartikTalwar/DuolingoUnofficial Duolingo API Written in Python, Hopefully Corrected
Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.
Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
segmentation of spherical vesicles in cryo-electron tomography
A containerized CryoSparc proof-of-concept
High accuracy RAG for answering questions from scientific documents with citations
Ingest files for retrieval augmented generation (RAG) with open-source Large Language Models (LLMs), all without 3rd parties or sensitive data leaving your network.
Private & local AI personal knowledge management app for high entropy people.
Official code for "Boundary loss for highly unbalanced segmentation", runner-up for best paper award at MIDL 2019. Extended version in MedIA, volume 67, January 2021.
Get up and running with Llama 3.3, DeepSeek-R1, Phi-4, Gemma 3, Mistral Small 3.1 and other large language models.
Parallel cryo electron tomography via beam image shift
Smart Parallel Automated Cryo Electron tomography
Automated pipeline to generate and process simulated cryo-electron tomography data
The official codes for "PMC-LLaMA: Towards Building Open-source Language Models for Medicine"
Here are the prompts I’ve created and want to share.
Statistical package in Python based on Pandas
Machine Learning for Algorithmic Trading, Second Edition - published by Packt
Implementation of Denoising Diffusion Probabilistic Model in Pytorch
🚀 A simple way to launch, train, and use PyTorch models on almost any device and distributed configuration, automatic mixed precision (including fp8), and easy-to-configure FSDP and DeepSpeed support
Scientific Inkscape: Inkscape extensions for figure resizing and editing
Dollar-Cost Averaging bot for cryptocurrency pairs on Kraken exchange.
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Making Protein folding accessible to all!
EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.