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Thomas Cokelaer edited this page Jan 15, 2019 · 3 revisions
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Useful tools to look at:

FASTQ manipulation: https://github.com/alastair-droop/fqtools VCF, BED and others: http://lindenb.github.io/jvarkit/

http://bioinformatics.cvr.ac.uk/blog/a-compilation-of-conversion-tools-for-bed-sambam-psl-pslx-blast-tabular-and-blast-xml/

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