8000 Bam2fastq conversion · Issue #325 · bioconvert/bioconvert · GitHub
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Bam2fastq conversion #325
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@khourhin

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@khourhin

Bamt2fastq conversion has an non intuitive behavior:

  • when reads are paired: it creates a temporary fast.gz which is actually a fastq uncompressed with both reads and then creates 2 fastq.gz with R1 and R2 separated
  • when reads are single: it creates correctly a fastq.gz

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