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blaseRtemplates Public
Templates and Functions for Blaser Lab Projects
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signac Public
Forked from stuart-lab/signacR toolkit for the analysis of single-cell chromatin data
R Other UpdatedJan 17, 2025 -
garnett Public
Forked from cole-trapnell-lab/garnettAutomated cell type classification
R MIT License UpdatedDec 23, 2024 -
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genotyping.functions Public
What the Package Does (One Line, Title Case)
R Other UpdatedOct 15, 2024 -
Linux-cheat-sheet Public
Forked from sudheerj/Linux-cheat-sheetList of Linux commands
UpdatedJul 23, 2024 -
shinybmt Public
Forked from jwang-580/shinybmtA shiny app for bmt data analysis
R Other UpdatedJun 17, 2024 -
OncLLMExtraction Public
Forked from MadhumitaSushil/OncLLMExtractionExpert-Curated Oncology Reports to Advance Language Model Inference
Python Other UpdatedApr 17, 2024 -
segment-anything Public
Forked from facebookresearch/segment-anythingThe repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
Jupyter Notebook Apache License 2.0 UpdatedApr 17, 2024 -
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DoubletFinder Public
Forked from chris-mcginnis-ucsf/DoubletFinderR package for detecting doublets in single-cell RNA sequencing data
R UpdatedFeb 15, 2024 -
SCENIC Public
Forked from aertslab/SCENICSCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
HTML GNU General Public License v3.0 UpdatedDec 20, 2023 -
rnaseqGene Public
Forked from thelovelab/rnaseqGeneRNA-seq workflow: exploratory analysis and differential expression
TeX UpdatedNov 14, 2023 -
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Rebuilt danRer11 genome using only standard chromosomes.
R UpdatedAug 3, 2023 -
flt3_aml_bakerlab Public
Analysis scripts, plots and stats for FLT3-ITD AML sample scRNAseq
R MIT License UpdatedJul 14, 2023 -
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Annotation package for TxDb object(s)
R Other UpdatedMar 20, 2023 -
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