This singularity definition file is meant to closely mirror the dockerfile for agalma. Singularity containers are well suited for running docker-like workflows in multi-user contexts, such as HPC clusters. Please see the linux or MacOS install instructions to get singularity.
To build this Singularity image:
sudo $(which singularity) build agalma.simg Singularity.latest
To pull this Singularity image from singularity-hub and run the agalma tests in current directory:
singularity run shub://brevans/agalma:latest