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Broad Institute & Nimbus Informatics, LLC
- San Jose, CA
- https://github.com/briandoconnor
- @boconnor
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synapse-tutorial-2023 Public
A tutorial for using Synapse.org
Jupyter Notebook Apache License 2.0 UpdatedAug 3, 2023 -
ga4gh-service-registry-impl Public
Forked from ga4gh-discovery/ga4gh-service-registry-implReference implementation of GA4GH Service Registry specification.
Java Apache License 2.0 UpdatedJul 11, 2023 -
Common Workflow Language Apache License 2.0 Updated
Jul 11, 2023 -
Adv360-Pro-ZMK Public
Forked from KinesisCorporation/Adv360-Pro-ZMKProduction repository for the all-new Advantage360 Professional using ZMK engine
Shell MIT License UpdatedDec 29, 2022 -
sage-smartsheet-to-doc Public
a simple Python script to convert a Smartsheet to a doc
Python Apache License 2.0 UpdatedApr 11, 2022 -
ncpi-interop-demo-oct-2021 Public
Demo of interop for NCPI as of Oct 2021. Includes data access over DRS for AnVIL, BDCat, CRDC, and GMKF.
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ras-passport-example Public
Forked from broadinstitute/ras-passport-examplePython UpdatedMay 14, 2021 -
anvil-ega-downloader Public
example downloading WDL for EGA
WDL Apache License 2.0 UpdatedMay 6, 2021 -
terra-app Public
Forked from DataBiosphere/terra-appShell BSD 3-Clause "New" or "Revised" License UpdatedApr 5, 2021 -
ncpi-dataset-interop-survey Public
A repo to support code to query and update a dataset availability summaries useful for NCPI interoperability efforts.
Python Apache License 2.0 UpdatedMar 8, 2021 -
broad-gtex-checksum-checker Public
A repo for the Dockerfile, WDL, and script to check that GTEx files have the correct checksum
Apache License 2.0 UpdatedFeb 19, 2021 -
blog-docker-dev-environment-example Public
Forked from a7ul/blog-docker-dev-environment-exampleExample repo for the blog post on docker local development environments
Python UpdatedFeb 6, 2021 -
PythonDataScienceHandbook Public
Forked from jakevdp/PythonDataScienceHandbookPython Data Science Handbook: full text in Jupyter Notebooks
Jupyter Notebook MIT License UpdatedDec 15, 2020 -
plenary-resources-2020 Public
Forked from DNAstack/plenary-resources-2020Resources for the GA4GH 2020 Plenary.
WDL UpdatedSep 21, 2020 -
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anvil-docker Public
Forked from anvilproject/anvil-dockerDocker containers for Anvil Project
Dockerfile MIT License UpdatedAug 17, 2020 -
leonardo Public
Forked from DataBiosphere/leonardoNotebook service
Scala BSD 3-Clause "New" or "Revised" License UpdatedJun 11, 2020 -
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fastqc Public
Forked from wshands/fastqcFiles for putting fastqc in Dockstore
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Amazon-Fresh-Whole-Foods-delivery-slot-finder Public
Forked from ahertel/Amazon-Fresh-Whole-Foods-delivery-slot-finderA Mac tool that finds available delivery slots for Amazon's Whole Foods delivery and Amazon Fresh services
AppleScript MIT License UpdatedApr 17, 2020 -
h3agwas Public
Forked from h3abionet/h3agwasGWAS Pipeline for H3Africa
Python Other UpdatedJul 26, 2019 -
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five-dollar-genome-analysis-pipeline Public
Forked from gatk-workflows/five-dollar-genome-analysis-pipelineWorkflows used for germline short variant discovery in WGS data
WDL BSD 3-Clause "New" or "Revised" License UpdatedSep 14, 2018 -
my-sandbox Public
A place for throwaway and prototype code.
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collections-prototype Public
Forked from AWSinAction/apigatewayCollections API prototype based on AWS in Action: API Gateway
Java UpdatedMar 29, 2018 -