8000 c-zhou (Chenxi Zhou) / Starred · GitHub
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  • University of Cambridge
  • Cambridge, UK

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Achievement: Starstruckx2Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Starstruckx2Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

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Stars

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richarddurbin / ONEsv

C 6 1 Updated Apr 2, 2025

guanshaoheng / PretextView

Forked from sanger-tol/PretextView

OpenGL Powered Pretext Contact Map Viewer

C++ 3 Updated May 8, 2025

richarddurbin / syng

syncmer graphs, and perhaps other sorts of sequence graphs

C 20 1 Updated Mar 31, 2025

piosierra / pantera

Identification of transposable element families from pangenome polymorphisms

Slash 45 1 Updated Mar 7, 2025

thegenemyers / FASTGA

Pairwise whole genome aligner

C 155 9 Updated May 2, 2025

thegenemyers / MERQURY.FK

FastK based version of Merqury

C 25 3 Updated Apr 17, 2025

sjin09 / hapfusion

Python 2 Updated Jul 25, 2023

thegenemyers / ONEcode

1-code framework: docs, C-library, and tools

C 17 3 Updated Jan 22, 2025

sanger-tol / genomeassembly

Implementation of ToL genome assembly workflows

Nextflow 20 4 Updated May 21, 2025

richarddurbin / gaffer

a GFA toolkit

C 13 2 Updated Oct 4, 2024

tolkit / gfatk

A plant organellar Graphical Fragment Assembly toolkit

Rust 16 1 Updated Oct 11, 2024

lh3 / seqtk

Toolkit for processing sequences in FASTA/Q formats

C 1,461 310 Updated Aug 10, 2024

dfguan / purge_dups

haplotypic duplication identification tool

C 241 23 Updated Dec 23, 2023

marcelauliano / MitoHiFi

Find, circularise and annotate mitogenome from PacBio assemblies

Python 181 30 Updated May 11, 2025

dfguan / pin_hic

A Hi-C scaffolding method

C 23 3 Updated Dec 22, 2021

OI-wiki / OI-wiki

🌟 Wiki of OI / ICPC for everyone. （某大型游戏线上攻略，内含炫酷算术魔法）

TypeScript 23,181 4,240 Updated May 24, 2025

thegenemyers / FASTK

A fast K-mer counter for high-fidelity shotgun datasets

C 128 17 Updated May 24, 2025

lbcb-sci / raven

De novo genome assembler for long uncorrected reads

C++ 221 20 Updated Nov 15, 2023

c-zhou / polyGembler

Java 16 2 Updated Jun 30, 2022

lachlancoin / npTranscript

Analysis of nanopore transcript sequence data

Java 4 2 Updated May 23, 2025

eweitz / ideogram

Chromosome visualization for the web

JavaScript 299 72 Updated May 20, 2025

RCollins13 / HumanIdiogramLibrary

Resource of human chromosome schematics & images

93 11 Updated Sep 4, 2024
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