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Starred repositories

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A Pytorch implementation of the mixed-scale dense network described in https://doi.org/10.1073/pnas.1715832114

Python 24 10 Updated Nov 8, 2023

⛄ Differentiable Manifold Reconstruction for Point Cloud Denoising (ACM MM 2020)

Python 126 18 Updated Aug 15, 2021

A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation

Python 719 201 Updated Jul 6, 2018

PyTorch implementation of Mixed-Scale Dense Convolutional Neural Network (MS-D Net) for Image Analysis

Python 31 15 Updated Mar 14, 2018

Contextual Analysis Tools for cryoET and subtomogram averaging

Jupyter Notebook 29 4 Updated Jun 15, 2025

Python implementation of the Mixed-Scale Dense Convolutional Neural Network

Python 34 16 Updated Mar 15, 2023

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Python 1,978 432 Updated Nov 13, 2020

A collection of loss functions for medical image segmentation

Python 3,924 611 Updated Nov 1, 2023

LeViT a Vision Transformer in ConvNet's Clothing for Faster Inference

Python 613 73 Updated Aug 27, 2022

Official Open Source code for "Masked Autoencoders As Spatiotemporal Learners"

Python 341 33 Updated Nov 26, 2024

Explainability for Vision Transformers

Python 967 103 Updated Mar 12, 2022

BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)

Python 7,472 828 Updated Jun 1, 2025

PINNs-Torch, Physics-informed Neural Networks (PINNs) implemented in PyTorch.

Python 548 82 Updated Jun 13, 2025

Physics Informed Deep Learning: Data-driven Solutions and Discovery of Nonlinear Partial Differential Equations

Python 4,740 1,406 Updated May 23, 2024

A simple, fully convolutional model for real-time instance segmentation.

Python 5,130 1,321 Updated Nov 6, 2023

Investigate the number of vertices of two-dimensional projections of polyhedra

Python 1 Updated May 14, 2024

Visualizer for neural network, deep learning and machine learning models

JavaScript 30,460 2,921 Updated Jun 15, 2025

Latex code for making neural networks diagrams

TeX 23,520 2,977 Updated Aug 21, 2023

Demo implementation of smoothly filling holes in 3D meshes using surface fairing

C++ 311 54 Updated Feb 26, 2018

pytorch implementation of noise2noise for Cryo-EM image denoising

Python 43 13 Updated Jan 3, 2019

For medical image segmentation

Python 38 6 Updated Oct 18, 2021

Tools to Design or Visualize Architecture of Neural Network

4,893 603 Updated Jan 28, 2024
Python 1,121 345 Updated May 27, 2025
C++ 23 8 Updated Jun 11, 2025

The code for Expectation-Maximization Attention Networks for Semantic Segmentation (ICCV'2019 Oral)

Python 681 128 Updated May 25, 2020

Segment Anything in Medical Images

Jupyter Notebook 3,582 497 Updated May 7, 2025

This is Pytorch Implementation Code for adding new features in code of Segment-Anything. Here, the features support batch-input on the full-grid prompt (automatic mask generation) with post-process…

Python 155 11 Updated Dec 7, 2023

Let us control diffusion models!

Python 32,539 2,906 Updated Feb 25, 2024

Generate videos that interpolate between two given images

Python 100 10 Updated Aug 9, 2023
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