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v1.5

Toggle v1.5's commit message 
 1.5 :

  - "unitialized value" warnings caused by UCSC model lookups fixed.
  - TRF data should be in UCSC BED format which uses 0-based/half-open coordinates.
    Fixed a bug in the code where 1-based was assumed, causing a zero-valued start
    coordinate to go negative.
  - createModel.pl: Added support for relative paths in input parameters.

v1.4

Toggle v1.4's commit message 
 Bug: If a genome FASTA file contains a description after the

       identifier, createModel will fail to match annotations
       to the sequences correctly.

  Also a few warnings/logs pertaining to the parsing and use of
  simple repeat data during model creation.

v1.3

Toggle v1.3's commit message 
 - Tidy'd createFakeSequence.pl

  - Removed unused versions of the create* scripts.

v1.2

Toggle v1.2's commit message 
Bug in perl < 5.12 for large strings

Garlic-v1.2

Toggle Garlic-v1.2's commit message 
Bug in perl < 5.12 for large strings

v1.1

Toggle v1.1's commit message 
fixing conflict
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