Lists (3)
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Antibody Numbering and Antigen Receptor ClassIfication
Allows to score gene programs in Kinetic Trajectory datasets of CD8+ T cell differentiation to contextualize T cell gene programs and infer differentiation states (see Jaiswal et al Cancer Cell 202…
Get up and running with Llama 3.3, DeepSeek-R1, Phi-4, Gemma 3, Mistral Small 3.1 and other large language models.
Material for Shiny Conf 2025 Workshop on Shiny performance
clinicaltrialr: Import study records from ClinicalTrials.gov
Tutorial on large language models for genomics
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Genome-scale design tool for oligo hybridization probes
A cross-platform proteomics data analysis suite
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.
Convert proteomics data files into a SQLite database
Computational pipeline for designing sgRNA libraries for CRISPR/Cas9 base editing.
Explainable AI for Bioinformatics
Computational identification of targets for CAR-T cell therapy in AML
T/B cell receptor sequencing analysis notes
Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology
R package for querying the DrugBank database in batch locally
Explore the reproducibility of Seurat pipeline
2021年最新总结，推荐工程师合适读本，计算机科学，软件技术，创业，思想类，数学类，人物传记书籍
R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem