Code associated with the publication in Molecular Cell Figure 6E (https://www.sciencedirect.com/science/article/pii/S1097276520308376)
To reproduce the main findings in the paper, simply download the "TXT_RQ" and "TXT_noRQ" folders in the proteomics repository indicated in the paper and run this code. "20190518_ProteinGroups.R" will extract relevant protein level information and perform data filtering and manipulation for analysis. It also include data visualization.