Tags: covingto/pancanmafmerge
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This tag reflects the addition of algorithms for finding the best "PR… …IMARY" sample from broad calls which may list a sample as METASTATIC or RECURRENT. Also adds a filter for radia calls. We found that there is a bug in radia whereby variants are called PASS but Germline when no RNA is available. Files affected by this were cleared and reprocessed, however the majority of data was actually processed using v0.1 of this codebase for the initial MAF merge.