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Starred repositories
fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.
Neuroimaging analysis and visualization suite
A package to create simple 3D network visualizations on a brain.
DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
Mapper-based framework for naturalistic neural data
This project provides the codes for the nested-spectral partition (NSP) method based on eigenmodes of human brain functional networks, and the measures of integration and segregation component.
Neuropipe with specific scripts for analysing infant fMRI data collected with experiment_menu
script necessary for aligning surfaces (derived from the dHCP structural pipeline) to the dHCP surface template space
For calculating exact geodesic distances on cortical surface meshes
PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
Plot the boundaries of ROIs on a surface
Configurable Pipeline for the Analysis of Connectomes
🎨🎨🎨 Collection of most color palettes in a single R package
The data and code of Saberi et al. 2023 PLOS Biology
Codes for the project "development of functional topography"
structural analysis of neonatal brain MRI scans
A toolbox for working with Allen Human Brain Atlas microarray expression data
Files associated with Ladwig et al. on relationship between high cofluctuation BOLD events and static FC.
Preprocessing of arterial spin labeling (ASL) data
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Scripts used for BigBrain cortical layers paper