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KeyError with <code>create_splice_sites</code> with database derived from GTF file

#239

· kbseah opened

on May 23, 2025

Infer genes in gff3 files

#238

· FabianJetzinger opened

on Mar 26, 2025

Trouble with db.region(..., completely_within=True)

#234

· Lservi opened

on Jun 19, 2024

test_roundtrip fails: test_roundtrip

#233

· yurivict opened

on Jun 16, 2024

Value of Target attribute gains quotes when it shouldn't in round trip manipulation

feature request

#230

· photocyte opened

on Apr 5, 2024

gffutils-cli incompatability with argh >= 0.30.0

#224

· photocyte opened

on Nov 6, 2023

merge_strategy='create_unique' not always creating unique id's

needs-discussion

#214

· novigit opened

on Apr 25, 2023

create_db() does not parse directives from GFF files starting in v0.11.0

needs-discussion

#213

· dtdoering opened

on Apr 7, 2023

Field separators in quoted attributes cause error

needs-discussion

#212

· zwpwjwtz opened

on Apr 1, 2023

db.parents(id) stops at level 2?

#204

· dariober opened

on Jan 12, 2023

Map transcript coordinates to genome coordinates

feature request

#203

· dariober opened

on Jan 5, 2023

Support for fasta at end

#127

· innovate-invent opened

on Apr 26, 2019

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