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synapser Public
Forked from Sage-Bionetworks/synapserAn R package providing programmatic access to Synapse
R Apache License 2.0 UpdatedJul 31, 2024 -
sarek Public
Forked from Sage-Bionetworks-Workflows/sarekAnalysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow MIT License UpdatedMar 25, 2024 -
nextflow-infra Public
Forked from Sage-Bionetworks-Workflows/nextflow-infraAWS CloudFormation templates for deploying Nextflow infrastructure
Python Apache License 2.0 UpdatedDec 29, 2023 -
synapsePythonClient Public
Forked from Sage-Bionetworks/synapsePythonClientProgrammatic interface to Synapse services for Python
Python Apache License 2.0 UpdatedDec 15, 2023 -
data_curator_config Public
Forked from Sage-Bionetworks/data_curator_configProject configurations for the Data Curator App
UpdatedNov 9, 2023 -
synapserutils Public
Forked from thomasyu888/synapserutilsR package for Synapse utilities
R Apache License 2.0 UpdatedSep 16, 2023 -
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VEOIBD-metadata-dictionary Public
Forked from nf-osi/nf-metadata-dictionaryVersioned releases of the VEOIBD metadata dictionary.
R Creative Commons Zero v1.0 Universal UpdatedApr 28, 2023 -
scicomp-provisioner Public
Forked from Sage-Bionetworks/scicomp-provisionerAn service to auto provision resources
Shell Apache License 2.0 UpdatedNov 3, 2022 -
challengeutils Public
Forked from Sage-Bionetworks/challengeutilsSynapse challenge utility functions
Python Apache License 2.0 UpdatedJul 28, 2022 -
schematic Public
Forked from Sage-Bionetworks/schematicPackage for biomedical data model and metadata ingress management
Python MIT License UpdatedMar 14, 2022 -
sysbioDCCjsonschemas Public
Forked from Sage-Bionetworks/sysbioDCCjsonschemasSysBio DCC JSON schemas
Python UpdatedFeb 15, 2022 -
sage-sandbox Public
Forked from BrunoGrandePhD/sage-sandboxA place to experiment for all things Sage!
Python MIT License UpdatedJan 31, 2022 -
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data_model Public
Forked from imCORE-DCC/data_modelVersioned history of the imCORE data model
UpdatedOct 28, 2021 -
synapseAnnotations Public
Forked from Sage-Bionetworks/synapseAnnotationsSage Bionetworks derived standards for annotating content in Synapse.
R MIT License UpdatedOct 6, 2021 -
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