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PyRate Public
PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.
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npBNN Public
Bayesian neural networks using Numpy and Scipy
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fossilBM Public
Bayesian inference of trait evolution under a “fossilized” Brownian motion.
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rootBBB Public
Clade age estimation using a Bayesian Brownian bridge model
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LiteRate Public
Fast estimation of immigration, birth and death rates from large datasets using reversible jump MCMC
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gdgt-ai Public
Estimation of climatic variables using GDGT data and neural networks
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iucn_sim_dev Public
Forked from tandermann/iucn_extinction_simulatorA program for estimating extinction probability and date for a given set of species, based on IUCN threat assessments
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agez Public
Age estimation from zircon samples
Python GNU Lesser General Public License v2.1 UpdatedAug 12, 2022 -
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ProvenanceFinder Public
Probabilistic estimation of the source of origin of sediments
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mcmc-diversitree Public
This repository includes Bayesian implementations of the MuSSE and ClaSSE methods. The use of (half-Cauchy or Exponential) hyper-priors on the rate parameters allows to control for overparameteriza…
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micro2macroEvolution Public
Forward individual-based simulations of evolution to link microevolutionary processes to macroevolution
Python UpdatedJun 10, 2020 -
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raxmlGUI Public
raxmlGUI 2.0 is now available: A new graphical interface for RAxML
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