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Jupyter Notebook 3 1 Updated May 12, 2025

The Artificial Intelligence for Life in Space (AI4LS) team at NASA Ames uses artificial intelligence and machine learning to support and advance space exploration. This repository contains code for…

Jupyter Notebook 12 5 Updated May 15, 2025
Jupyter Notebook 78 49 Updated May 23, 2025

A container registry for the scverse

Dockerfile 8 Updated Sep 10, 2024

Documentation for the Cho Lab

3 Updated Oct 4, 2024

Deep learning for protein science

Python 34 5 Updated Jun 2, 2024

A Python toolkit for subcellular analysis of spatial transcriptomics data

Python 79 7 Updated Mar 31, 2025

A novel machine learning pipeline to analyse spatial transcriptomics data

Python 223 28 Updated May 25, 2024

Interactive visualization of spatial omics data

Python 56 18 Updated May 19, 2025

Documentation that simply works

Python 23,386 3,758 Updated May 15, 2025

Tiny libvips / gtk+4 image viewer

C 158 11 Updated May 15, 2025

An open and interoperable data framework for spatial omics data

Python 280 61 Updated May 19, 2025

🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.

Python 218 24 Updated Jul 8, 2024

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,382 1,017 Updated Apr 21, 2025
Jupyter Notebook 9 9 Updated May 23, 2025

Perturbation Analysis in the scverse ecosystem.

Python 175 30 Updated May 23, 2025

A wrapper to simplify the execution of Single Cell analysis with the sc verse

Python 3 Updated Oct 7, 2024

Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

Python 214 41 Updated Jan 24, 2025
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ChoBioLab / annotation

A wrapper to execute the CellTypist automated annotation method with Seurat objects.

R 1 Updated Jul 13, 2023

Perturb-seq analysis package

Python 14 1 Updated May 2, 2024

Data associated with Duvallet et al. 2022 publication, "Nationwide trends in COVID-19 cases and SARS-CoV-2 RNA wastewater concentrations in the United States"

1 Updated May 10, 2022

Based on a true story

JavaScript 48,450 6,654 Updated Oct 23, 2023

Academic writing with Markdown

Python 354 21 Updated May 24, 2021

Python bindings (pylsl) for liblsl

Python 158 60 Updated Mar 11, 2025

Conjunctive Continuous Performance Task - a sustained attention test

Python 5 10 Updated May 21, 2014

Programming for Cognitive and Brain Sciences (code and lectures notes for the Cogmaster's PCBS course)

HTML 36 15 Updated Jun 24, 2024

A battery of cognitive tasks for the python toolkit expyriment. Programmed for the use on android and desktop devices.

Python 2 1 Updated Feb 7, 2019

Trigger to sync eeg device with psychtoolbox events

Arduino 3 Updated Sep 15, 2014
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