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org-mode modules for citations, cross-references, bibliographies in org-mode and useful bibtex tools to go with it.

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org-ref: citations, cross-references, indexes, glossaries and bibtex utilities for org-mode

MELPA

See http://www.youtube.com/watch?v=Zya8SfmCtFA and https://www.youtube.com/watch?v=JyvpSVl4_dg for examples of org-ref in action.

./org-ref.org contains all documentation and installation instructions.

Installation

Package installation via Melpa

org-ref has been added to Melpa.

(add-to-list 'package-archives
	     '("melpa" . "http://melpa.org/packages/") t)

Then, you should be able to do M-x package-list-packages, find org-ref and install it.

Installation via github

Clone this repo, add it to your load-path, and require org-ref.

git clone git@github.com:jkitchin/org-ref.git

Configuration

You should set these variables. Here is an example of how mine are set in an init.el file.

(setq reftex-default-bibliography '("~/Dropbox/bibliography/references.bib"))

;; see org-ref for use of these variables
(setq org-ref-bibliography-notes "~/Dropbox/bibliography/notes.org"
      org-ref-default-bibliography '("~/Dropbox/bibliography/references.bib")
      org-ref-pdf-directory "~/Dropbox/bibliography/bibtex-pdfs/")

(setq helm-bibtex-bibliography "~/Dropbox/bibliography/references.bib")
(setq helm-bibtex-library-path "~/Dropbox/bibliography/bibtex-pdfs")

;; open pdf with system pdf viewer (works on mac)
(setq helm-bibtex-pdf-open-function
  (lambda (fpath)
    (start-process "open" "*open*" "open" fpath)))

;; alternative
;; (setq helm-bibtex-pdf-open-function 'org-open-file)

(setq helm-bibtex-notes-path "~/Dropbox/bibliography/helm-bibtex-notes")

You may want to set some convenient keys for working in your bibtex file. These commands operate on the citation key at point.

(global-set-key [f10] 'org-ref-open-bibtex-notes)
(global-set-key [f11] 'org-ref-open-bibtex-pdf)
(global-set-key [f12] 'org-ref-open-in-browser)

Add this to your init.el files.

(require 'org-ref)

Go forth and citate.

Some other useful libraries in org-ref

Note many of these have been renamed with an org-ref prefix.

doi-utils
Download bibtex entries and PDFs from doi and crossref queries.
org-ref-pdf
Add drag-n-drop PDF to create bibtex entries
org-ref-url-utils
Add drag-n-drop urls to create bibtex entries
org-ref-bibtex
Utility functions for bibtex
org-ref-latex
org-ref-like features in LaTeX.
org-ref-arxiv
arxiv links, add bibtex entries from arxiv.org.
org-ref-pubmed
pubmed links, add bibtex entries from PMID.
org-ref-isbn
Add bibtex entries from a book ISBN
org-ref-wos
WebOfKnowledge links and queries
org-ref-scopus
Scopus links and queries
x2bib
Convert bibliography formats to and from bibtex
nist-webbook
Links to NIST Webbook resources

Errors and issues

Please report errors here: issues.

Contributors

I would like to thank the contributors to org-ref, and everyone who has filed an issue, or asked about org-ref on the org-mode Mailing list.

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