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Lists (3)
Starred repositories
A curated list of deep learning image classification papers and codes
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
The Washington Post is compiling a database of every fatal shooting in the United States by a police officer in the line of duty since 2015.
basic walk-throughs for alignment and variant calling from NGS sequencing data
Official code repository for GATK versions 4 and up
web-based analysis tool for rare disease genomics
Workflows used for processing whole genome sequence data + germline variant calling. This Repository has been archived, please visit the link the ReadMe to obtain the latest version of the workflow.
Variant Calling Pipeline Using GATK4 and Nextflow
A structural variation pipeline for short-read sequencing
This Snakemake pipeline implements the GATK best-practices workflow
imsarath / GATK_pipeline
Forked from drvenki/gatk_basicA very simple and basic shell script to run GATK best practice pipeline
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
Tesseract Open Source OCR Engine (main repository)
Leaked GPTs Prompts Bypass the 25 message limit or to try out GPTs without a Plus subscription.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
List of Computer Science courses with video lectures.
tools for genetic genealogy and the analysis of consumer DNA test results
Source code for Gramps Genealogical program
A python interface for genealogical tools (Geni, RootsMagic, GEDCOM, Family Search...)
A topic-centric list of HQ open datasets.
Data and code behind the articles and graphics at FiveThirtyEight