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10000 Understand How to Interpret the Coefficients of a Categorical Linear Model

R 10 1 Updated Apr 27, 2022

It discovers linear dependent columns and then replaces linear dependent columns with linearly independent columns that span the space of the original columns. This results in a full rank matrix t…

R 14 1 Updated Jul 4, 2024

A curated list of projects related to the reMarkable tablet

6,709 230 Updated May 23, 2025

A script for synchronizing the reMarkable e-reader

Jupyter Notebook 97 10 Updated May 6, 2022

Apps Script library for synchronising Google Drive folder with Remarkable reader.

JavaScript 118 17 Updated Nov 28, 2022

A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.

Jupyter Notebook 25 4 Updated Jan 3, 2025

Genomic Features in Python from BioConductor's AnnotationHub

Python 21 6 Updated May 19, 2025

💌 Create simple, beautiful personal websites and landing pages using only R Markdown.

HTML 560 91 Updated Dec 21, 2022

Python implementation of Milo for differential abundance testing on KNN graph

Jupyter Notebook 68 9 Updated Feb 17, 2025

Aligning gene expression trajectories of single-cell reference and query systems

Jupyter Notebook 65 8 Updated Oct 14, 2024

Multi-resolution Variational Inference

Python 22 8 Updated Mar 31, 2025

A library of free open source icons for science illustrations in biology and chemistry

Vue 1,466 84 Updated May 22, 2025

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

Jupyter Notebook 68 12 Updated Apr 10, 2025

Cross referencing for Google Docs

JavaScript 82 21 Updated May 23, 2023

Perturbation Analysis in the scverse ecosystem.

Python 176 30 Updated May 23, 2025

Multimodal datasets, in MuData format

Python 2 1 Updated Jan 13, 2023

Cookiecutter template for scverse

Python 78 12 Updated May 19, 2025

Performant Pythonic GenomicRanges

Python 469 49 Updated Mar 14, 2025

Multimodal Data (.h5mu) implementation for Python

Python 98 19 Updated May 17, 2025

Statistical Rethinking course winter 2022

R 4,112 442 Updated Mar 15, 2022

Deep probabilistic analysis of single-cell and spatial omics data

Python 1,378 389 Updated May 25, 2025

Multi-omic velocity inference

Python 110 11 Updated Oct 23, 2024

Guide for getting a gig as a tech student.

7,488 697 Updated Apr 21, 2025

Multiome GRN inference.

R 122 22 Updated Apr 19, 2024

All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs

R 41 12 Updated Mar 20, 2023
Python 37 8 Updated Sep 27, 2024

muon is a multimodal omics Python framework

Python 235 31 Updated Feb 28, 2025
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