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Biomni: a general-purpose biomedical AI agent
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.
Early feature extraction determines performance: systematic evaluation of deep learning models for high-resolution chromatin accessibility prediction
Interactive visualizations of the geometric intuition behind diffusion models.
Agentic Cell type annotation for Anndata objects
Lightweight coding agent that runs in your terminal
An open protocol enabling communication and interoperability between opaque agentic applications.
Collection of apple-native tools for the model context protocol.
Model Context Protocol Servers
Integrate the DeepSeek API into popular softwares
Arc Virtual Cell Atlas
LLM agents for working with the SRA and associated bioinformatics databases.
Supervised Independent Subspace Principal Component Analysis
A simple pip-installable Python tool to generate your own HTML citation world map from your Google Scholar ID.
Training Large Language Model to Reason in a Continuous Latent Space
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.
Template repository for analysis of single-cell data and tools.
A visualization grammar and GPU-accelerated toolkit for genomic data
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