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cutandrun
cutandrun PublicForked from nf-core/cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
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atacseq
atacseq PublicForked from nf-core/atacseq
ATAC-seq peak-calling and QC analysis pipeline
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sarek
sarek PublicForked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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PacBio-IsoSeq
PacBio-IsoSeq PublicAnalysis of PacBio IsoSeq data from both bulk and single-cell protocols
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