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zipper Public
Forked from sebastiandev/zipperC++ wrapper around minizip compression library
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libSEDML Public
SED-ML library based on libSBML
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sysbioapps Public
sysbioapps is a resource of computational tools and services for systems biology
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libSSR Public
Forked from tjsego/libSSRLibrary for Stochastic Simulation Reproducibility
MIT License UpdatedApr 24, 2025 -
test-copasi Public
Test for Github Actions
Python BSD 2-Clause "Simplified" License UpdatedApr 22, 2025 -
libexpat Public
Forked from libexpat/libexpat🌿 Fast streaming XML parser written in C99 with >90% test coverage; moved from SourceForge to GitHub
C MIT License UpdatedApr 18, 2025 -
whisper-gui Public
A GUI application for Whisper speech recognition using pyside
Python MIT License UpdatedApr 3, 2025 -
whisper Public
Forked from openai/whisperRobust Speech Recognition via Large-Scale Weak Supervision
Python MIT License UpdatedApr 2, 2025 -
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libpetab-python Public
Forked from PEtab-dev/libpetab-pythonPython package for working with PEtab files
Python MIT License UpdatedDec 5, 2024 -
model_replicator Public
Forked from copasi/sbmodelra tool to replicate one SBML/COPASI model into a set of replicas
PythonArtistic License 2.0 Updated Nov 5, 2024 -
MTPHandler Public
Forked from FAIRChemistry/MTPHandler🔬 mtphandler is Python package for processing, enriching, and converting microtiter plate data into standardized EnzymeML time-course data, ready for data science
Python MIT License UpdatedSep 24, 2024 -
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pyodide-copasi Public
Vue3 Project using Pyodide / basico and python-copasi emscripten
CSS BSD 2-Clause "Simplified" License UpdatedJun 21, 2024 -
SimBioUI Public
Forked from sys-bio/SimBioUIWeb systems biology simulator
JavaScript MIT License UpdatedMay 1, 2024 -
deviser Public
Forked from sbmlteam/deviserDesign Explorer and Viewer for Iterative SBML Enhancement of Representations
C++ GNU Lesser General Public License v2.1 UpdatedFeb 12, 2024 -
sed-ml.github.io Public
Forked from SED-ML/sed-ml.github.ioSED-ML website
HTML Creative Commons Zero v1.0 Universal UpdatedNov 15, 2023 -
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makesbml Public
Forked from sys-bio/makesbmlSimple site to convert antimony to sbml
HTML Apache License 2.0 UpdatedApr 24, 2023 -
PEtab Public
Forked from PEtab-dev/PEtabPEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
MIT License UpdatedApr 21, 2023 -
AMICI Public
Forked from AMICI-dev/AMICIAdvanced Multilanguage Interface to CVODES and IDAS
C++ Other UpdatedApr 18, 2023 -
fbc_curation Public
Forked from matthiaskoenig/fbc_curationFROG analysis in python for the reproducibility of FBC models
Python GNU Lesser General Public License v3.0 UpdatedDec 5, 2022 -
FBA_perturbation Public
Forked from babakml/FBA_perturbationa toolbox to perturb FBA flux distribution in constraint-based metabolic networks
MATLAB UpdatedAug 27, 2021 -
liblx Public
Forked from sbmlteam/liblxThe XML parser portion of LibSBML as a separate library.
C++ Other UpdatedJun 24, 2021 -
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spatial-sbml Public
libraries & tools for spatial simulation of SBML models
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pyabc-copasi Public
Example Scripts for using COPASI simulations in pyABC
Python UpdatedMar 5, 2021 -
pyABC Public
Forked from ICB-DCM/pyABCdistributed, likelihood-free inference
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 24, 2021 -
Biosimulations_COPASI Public
Forked from biosimulators/Biosimulators_COPASICOPASI Simulator for BioSimulations
Python MIT License UpdatedNov 2, 2020
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