8000 FHOOE Hagenberg Bioinformatics/Proteomics Research Group · GitHub
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FHOOE Hagenberg Bioinformatics/Proteomics Research Group

Bioinformatics/Proteomics Research Group of the FH OOE Hagenberg
README.md

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  1. MSAmanda MSAmanda Public

    MS Amanda is a scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins.

    3

  2. MSAnnika MSAnnika Public

    MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.

    7

  3. MSAnnika_Extensions MSAnnika_Extensions Public

    List of all available extensions for our cross-linking search engine MS Annika.

  4. MSAnnika_Spectral_Library_exporter MSAnnika_Spectral_Library_exporter Public

    Generate a spectral library for Spectronaut from MS Annika results.

    Python 1

  5. CandidateSearch CandidateSearch Public

    Proof-of-concept implementation of a search engine that uses sparse matrix multiplication to identify the best peptide candidates for a given mass spectrum.

    C# 1 1

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