Stars
A curated collection of Nextflow implementation patterns
RSparsePro for robust fine-mapping in the presence of LD mismatch
RTG Tools: Utilities for accurate VCF comparison and manipulation
Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.
GWAS Summary Statistics Data Harmonisation
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
Documentation on new GWAS Summary Statistics Standard
Segmented HAPlotype Estimation and Imputation Tool
List of Open-Source in New Drug Applications NDAs FDA
Practical machine learning notebook & articles covers the machine learning end to end life cycle.
an R package that automates performance testing of ML models and summarizes the results in a dashboard w/ rad visualizations
12 Weeks, 24 Lessons, AI for All!
Public virology code from ECDC bioinformatics
Stores all scripts and an Analysis workflow description for analayzing metabolomics WES in INTERVAL.
regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.
Harmonise GWAS summary statistics against a reference VCF
hou / META_ANALYSIS
Forked from FINNGEN/META_ANALYSISTools for doing x way meta-analysis
Statistical fine-mapping pipeline in FinnGen
🐝 Awesome R and Python packages offering extended UI or server components for the web framework Shiny