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Starred repositories

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This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Python 1,001 103 Updated Jul 1, 2025

A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of…

Shell 23 2 Updated Jul 2, 2025

Breaking out the omics analysis bits from the AWS infra bits

Python 2 Updated Jun 29, 2025

Breaking out the AWS Parallel Cluster infra from the analysis pipelines

Shell 2 Updated Jul 2, 2025

Python Module Interfacing w/The FedEx Tracking API

Python 4 Updated Nov 4, 2023

slurm executor for use by snakemake when running on the slurm flavor which is unique to aws parallel cluster slrum pcluster.

Python 1 Updated May 29, 2025

The Pharmacogenomic Clinical Annotation Tool

Java 139 43 Updated May 16, 2025

This is the Personality Core for GLaDOS, the first steps towards a real-life implementation of the AI from the Portal series by Valve.

Python 4,914 367 Updated Jun 24, 2025

AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.

Python 176,725 45,865 Updated Jul 8, 2025

This is the development home of the workflow management system Snakemake. For general information, see

Python 2,518 600 Updated Jul 8, 2025

Lightweight and fast UI for nodejs-pool based project, initially designed for supportxmr.com

JavaScript 30 40 Updated Jul 19, 2024

RNA-seq workflow using STAR and DESeq2

Python 342 211 Updated Aug 1, 2024

A simple Snakemake profile for Slurm without --cluster-config

Shell 159 19 Updated Jun 2 8000 0, 2024

A transmembrane helix finder in Python 3.

Python 39 12 Updated Oct 4, 2023

transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation

Python 27 14 Updated Feb 28, 2024

Zebra Label Printing library & API (for network connected printers). Manage 100s of printers and ZPL label templates in one place.

Python 10 2 Updated May 9, 2024

ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

JavaScript 287 144 Updated Jul 1, 2025

Powering openhumans.org

Python 78 23 Updated Feb 21, 2025

Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.

Python 121 26 Updated Jun 16, 2025

Three dead person switches to lock MAC hardware if (face regognition fails, bluetooth device connection lost, location change) conditions are met.

HTML 1 Updated Feb 24, 2025

Mirror of askcos2-core for Chemhacktica

Python 50 7 Updated Aug 30, 2024

Mirror of askcos2-core for Chemhacktica

Python 1 Updated Aug 30, 2024

CAD and STL files for 3D printed parts of the MicroLab

19 12 Updated Jun 22, 2025

Aligns short reads using dynamic seed size with strobemers

C++ 173 22 Updated Jul 5, 2025

Python wrapper for wavefront alignment using WFA2-lib

Python 35 4 Updated Nov 19, 2024

CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens

Common Workflow Language 1 Updated Apr 19, 2019

AWS ParallelCluster is an AWS supported Open Source cluster management tool to deploy and manage HPC clusters in the AWS cloud.

Python 865 3C9E 315 Updated Jul 7, 2025

OpenAssistant is a chat-based assistant that understands tasks, can interact with third-party systems, and retrieve information dynamically to do so.

Python 37,407 3,280 Updated Aug 17, 2024
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