I was a PhD student, using bioinformatics to "Uncover the role of conductive nanomaterials in anaerobic digestion".
My work has mostly been the development of tools for analyses of meta-omics data, i.e., the study of the collective genomes, transcriptomes or proteomes of a microbial community.
These are the main tools I have developed for meta-omics analyses:
UPIMAPI, reCOGnizer and KEGGCharter are tools developed for the analyses of omics data, and optimized for handling the challenges of meta-omics.
MOSCA is a powerful pipeline developed for metagenomics (MG), metatranscriptomics (MT) and metaproteomics (MP) integrated analyses.
I'm an Early 🐤
🌞 Morning 1036 commits █████░░░░░░░░░░░░░░░░░░░░ 21.70 %
🌆 Daytime 2494 commits █████████████░░░░░░░░░░░░ 52.24 %
🌃 Evening 1012 commits █████░░░░░░░░░░░░░░░░░░░░ 21.20 %
🌙 Night 232 commits █░░░░░░░░░░░░░░░░░░░░░░░░ 04.86 %
📅 I'm Most Productive on Wednesday
Monday 821 commits ████░░░░░░░░░░░░░░░░░░░░░ 17.20 %
Tuesday 962 commits █████░░░░░░░░░░░░░░░░░░░░ 20.15 %
Wednesday 1345 commits ███████░░░░░░░░░░░░░░░░░░ 28.17 %
Thursday 669 commits ████░░░░░░░░░░░░░░░░░░░░░ 14.01 %
Friday 589 commits ███░░░░░░░░░░░░░░░░░░░░░░ 12.34 %
Saturday 42 commits ░░░░░░░░░░░░░░░░░░░░░░░░░ 00.88 %
Sunday 346 commits ██░░░░░░░░░░░░░░░░░░░░░░░ 07.25 %
📊 This Week I Spent My Time On
💬 Programming Languages:
Snakemake 36 mins ██████████░░░░░░░░░░░░░░░ 41.61 %
YAML 18 mins █████░░░░░░░░░░░░░░░░░░░░ 20.86 %
Bash 13 mins ████░░░░░░░░░░░░░░░░░░░░░ 15.55 %
Other 5 mins █░░░░░░░░░░░░░░░░░░░░░░░░ 05.89 %
Python 4 mins █░░░░░░░░░░░░░░░░░░░░░░░░ 05.73 %
🐱💻 Projects:
cfDNA-seq-clustering 1 hr 16 mins ██████████████████████░░░ 88.38 %
ansible-puli 5 mins ██░░░░░░░░░░░░░░░░░░░░░░░ 06.00 %
Unknown Project 4 mins █░░░░░░░░░░░░░░░░░░░░░░░░ 05.21 %
virtual-hpc 0 secs ░░░░░░░░░░░░░░░░░░░░░░░░░ 00.41 %
I Mostly Code in Python
Python 11 repos ███████░░░░░░░░░░░░░░░░░░ 28.95 %
HTML 9 repos ██████░░░░░░░░░░░░░░░░░░░ 23.68 %
Java 4 repos ███░░░░░░░░░░░░░░░░░░░░░░ 10.53 %
Shell 4 repos ███░░░░░░░░░░░░░░░░░░░░░░ 10.53 %
JavaScript 1 repo █░░░░░░░░░░░░░░░░░░░░░░░░ 02.63 %
Last Updated on 15/06/2025 18:58:15 UTC