Stars
Executable of trained model presented in Boll&Vázquez Montes de Oca et al. (unpublished).
a python library providing data processing and machine learning tools for computational omics, with emphasis on explainability
tutorials for xomx (https://github.com/perrin-isir/xomx)
Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis
The Scones web service system (subject concepts or named entities) is used to perform subject concepts and named entities tagging on a target document.
hands-on for NGS/SNParray CNV call trainning
A tutorial on structural variant calling for short read sequencing data
Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features
GitHub for the SIB courses NGS - Genome variant analysis
Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation