Stars
Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
An extremely fast Python package and project manager, written in Rust.
Smooth out the rough edges of AWS SSO (temporarily, until AWS makes it better).
Full stack, modern web application template. Using FastAPI, React, SQLModel, PostgreSQL, Docker, GitHub Actions, automatic HTTPS and more.
FastAPI framework, high performance, easy to learn, fast to code, ready for production
Typer, build great CLIs. Easy to code. Based on Python type hints.
serverless.tf is an opinionated open-source framework for developing, building, deploying, and securing serverless applications and infrastructures on AWS using Terraform.
Test data to be used for automated testing with the nf-core pipelines
Super small biological datasets for unit testing
Tool for running/managing ad hoc spark clusters on a Slurm cluster
pandas on AWS - Easy integration with Athena, Glue, Redshift, Timestream, Neptune, OpenSearch, QuickSight, Chime, CloudWatchLogs, DynamoDB, EMR, SecretManager, PostgreSQL, MySQL, SQLServer and S3 (…
An emacs starterkit for scientists and engineers
A RESTful API for AWS S3 using Express
Manage AWS ParallelCluster through an easy to use web interface
An approximate sequence pattern matcher for FASTQ/FASTA files.
VM based deployment for prototyping Big Data tools on Amazon Web Services
Magpie contains a number of scripts for running Big Data software in HPC environments, including Hadoop and Spark. There is support for Lustre, Slurm, Moab, Torque. LSF, Flux, and more.
Yet Another AWS SSO - sync up AWS CLI v2 SSO login session to legacy CLI v1 credentials
Get AWS SSO temporary creds from an SSO profile
Template for data pipelines, ML workflows, API dev and monitoring
Practical Data Engineering: A Hands-On Real-Estate Project Guide
GNU Emacs / N Λ N O - Emacs made simple
Deploy a KeyCloak cluster in AWS using Terraform