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labdata-tools Public
Utilities to copy data to and from the data server through python using rclone.
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atlas_registration Public
Tools to register whole brain reconstructions to standard atlases.
Python UpdatedMay 27, 2025 -
wfield Public
Tools to process widefield data
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labcams Public
Software to control and record from multiple cameras
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DeepTraCE Public
Forked from DeNardoLab/DeepTraCEDeep-learning based pipeline for analysis of whole-brain light sheet microscopy images
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labdaq Public
tools to control daq hardware for ephys or stimulation
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tensortools Public
Forked from neurostatslab/tensortoolsA very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
Python MIT License UpdatedAug 7, 2024 -
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fit_psychometric Public
Tutorials and functions to fit psychometric functions
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cshl_spks Public
Practical information about Neuropixels recordings for the CSHL Ion Channels in Synaptic and Neural Circuit Physiology 2023 course
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sbxreader Public
Reader for Neurolabware scanbox files
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isi-thorcam Public
A repo to record intrinsic signal imaging with thorcams.. because we can't always get the camera we want.
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GoNoGratingsOri Public
BehaviorTaskSensoryStimulation Go-No go Orientation detection task
Python GNU General Public License v3.0 UpdatedFeb 9, 2023 -
suite2p Public
Forked from MouseLand/suite2pcell detection in calcium imaging recordings
Jupyter Notebook GNU General Public License v3.0 UpdatedSep 20, 2022 -
trefide Public
Forked from ikinsella/trefideTrend Filter Denoising
Python Other UpdatedJul 30, 2021 -
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manipulators Public
Classes to control patch clamp micromanipulators.
Python GNU General Public License v2.0 UpdatedFeb 25, 2015 -
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prot Public
Simple automation scripts that work as a layer on top of lcg.
Shell The Unlicense UpdatedNov 26, 2013
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