8000 GitHub - jglaser/uniprot_sampler: Randomly sample from UniProt using sparql
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content

jglaser/uniprot_sampler

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

4 Commits
 
 
 
 

Repository files navigation

Random UniProtKB sampler

Decimate the UniRef50 database by a factor of 1/100000 and randomly sample EC (Enzyme commission) IDs, 1000 times

python mc_sample.py .5 1000 10000

Prequisite:

  • pip install tqdm SPARQLWrapper

About

Randomly sample from UniProt using sparql

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages

0