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chromHMM_snakemake_workflow Public
A snakemake workflow to produce chromHMM segmentation on input bam files.
Python UpdatedApr 25, 2025 -
stat_rethinking_2023 Public
Forked from rmcelreath/stat_rethinking_2023Statistical Rethinking Course for Jan-Mar 2023
R Creative Commons Zero v1.0 Universal UpdatedMar 14, 2023 -
Supplementary code for reproducing the manuscript figures in R.
HTML UpdatedJul 13, 2020 -
Supplementary code for Iwanami et al., 2020
HTML UpdatedJul 13, 2020 -
Supplementary code to reproduce manuscript figures in R.
HTML UpdatedJul 13, 2020 -
snakepipes_fork Public
Forked from maxplanck-ie/snakepipesA toolkit based on snakemake and python for analysis of NGS data
Python GNU General Public License v3.0 UpdatedJan 10, 2020 -
bulkRNAseq_shiny_app Public
Serves predefined user requests on inhouse bulkRNAseq data.
R UpdatedJan 28, 2019 -
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BS_amplicon_seq Public
Analysis pipeline for bisulfite amplicon sequencing.
Python UpdatedFeb 5, 2018 -
MakeBlastDB Public
Makes nucleotide blast database from quality processed sequencing reads. Forward and reverse mates are merged.
Python UpdatedJan 18, 2018 -
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Single_cell_RNAseq_R Public
Various R functions for single cell RNAseq data analysis and visualization