8000 kdm9 (Dr. K. D. Murray) / Starred · GitHub
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Offline till March 2025; Remind me if I don't respond
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Offline till March 2025; Remind me if I don't respond

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@borevitzlab @biocore @BioJulia @biospectrabysequencing @COMBINE-Canberra @bioconda @IWYP60 @plantimmunity

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ESP32-S3 ESP-IDF Components (I2C, 1-wire, SPI, ADC, etc.) GUVA-S12SD AHTXX AK8975 AS7341 BH1750FVI BME680 BMP280 BMP390 CCS811 ENS160 HDC1080 HMC5883L LTR390UV MMC56X3 MPU6050 SGP4X SHT4X SSD1306 T…

C 21 5 Updated Jun 7, 2025

🔽 Display any CSV (comma separated values) file as a searchable, filterable, pretty HTML table

CSS 1,696 354 Updated Mar 8, 2024
OpenSCAD 2 1 Updated Jul 3, 2025

Shine MP3 encoder for ESP32

C 24 3 Updated Dec 9, 2019

A collection of various audio encoder ports for the ESP32 LyraT board, including FLAC, MP3, and OPUS.

2 Updated May 21, 2022

Bare metal SDIO driver for STM32F405

C 1 Updated Dec 3, 2024

STM32 stuff

C 1,039 500 Updated Jan 31, 2022

STM32 library for working with OLEDs based on SSD1306, SH1106, SH1107 and SSD1309, supports I2C and SPI

C 902 243 Updated Jul 1, 2025

A drop-in replacement for argparse that allows options to also be set via config files and/or environment variables.

Python 748 121 Updated Jul 1, 2025

Pangenome-Informed Genome Assembly (PIGA) workflow for population-scale diploid genome assembly

Python 5 Updated Mar 20, 2025

Bioinformatics program inStrain

Python 174 36 Updated May 9, 2025

Open source HD video calls, screen sharing, and chat features powered by LiveKit. Built with Django and React.

TypeScript 714 55 Updated Jul 11, 2025

A collaborative note taking, wiki and documentation platform that scales. Built with Django and React.

Python 12,779 350 Updated Jul 14, 2025

An experimental Snakemake remote executor plugin that only requires ssh

Python 1 Updated Ma A85C r 26, 2025

quickly filter fastq files by matching sequences to a set of regex patterns

Rust 54 1 Updated Jul 5, 2025

Create videos of scrolling mel spectrograms from audio.

Python 3 Updated May 26, 2025

Various OpenScad project related to field recording

OpenSCAD 2 Updated Sep 16, 2024

Prodigal Gene Prediction Software

C 492 89 Updated Jan 23, 2024

Wrapper of some vim/neovim's :terminal functions.

Vim Script 1,333 116 Updated Mar 9, 2023

Genome Association Predict Integrate Tools

R 205 64 Updated Jul 10, 2025

experimental storage backend

Python 17 5 Updated May 22, 2025

Implements sorting algorithm for directed acyclic as well as cyclic graphs. The directed cyclic graphs are sorted by determining the minimal amount of cyclic edges and optionally then also determin…

Python 41 4 Updated Oct 16, 2023

PanTax: Strain-level metagenomic profiling using pangenome graphs

Python 39 2 Updated Jul 6, 2025

expressions on VCFs

Rust 85 3 Updated Apr 19, 2025

Bring a functional programming mindset to R Markdown document generation

R 28 1 Updated Jun 19, 2021

Docmost is an open-source collaborative wiki and documentation software. It is an open-source alternative to Confluence and Notion.

TypeScript 16,200 832 Updated Jul 14, 2025
Svelte 170 13 Updated Oct 7, 2024

OpenSCAD script to generate inserts for IKEA Samla boxes

OpenSCAD 74 12 Updated Apr 7, 2025

Long-read haplotyping of small sequences with SNP-encoded de Bruijn graphs

Rust 3 Updated Sep 30, 2024
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