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ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

Scala 1,023 315 Updated May 6, 2025

Phenotype comparison tools using semantic similarity.

Python 64 10 Updated Apr 22, 2024

Python library for extracting HPO encoded phenotypes from text

Python 29 4 Updated Apr 22, 2024
R 39 11 Updated Apr 22, 2024

Scripts used to generate the ClinVar conflicting classifications dataset on Kaggle

Python 15 9 Updated Jul 28, 2020
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