Stars
Jupyter notebooks for the ray-optics project
Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics
Computing the rigid transformation between two 3d point sets. The implementation follows the algorithm described in "Least-Squares Fitting of Two 3-D Point Sets"
Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data
Scoring of shape and ESP similarity with RDKit
Software for universal camera control and frames acquisition
direct control and reading of the TCD1304AP linear CCD array by a teensy 2++ (https://www.pjrc.com/store/teensypp.html)
Simple ray tracing library in Python for optical design that considers simple optical elements (with ABCD ray matrices) but also finite diameters of elements to calculate aperture and field stops, …
The Second Incarnation of the Spectrometer project!
Photo-Realistic Single Image Super-Resolution Using a Generative Adversarial Network | a PyTorch Tutorial to Super-Resolution
Codes and data for Unmixing
This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biological imaging.
General-purpouse camera capture plugin for data streaming to napari
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
Command Line Interface for executing CadQuery scripts and converting their output to another format.
Python package for device control and experiment automation
Parallel Molecular Docking using PLANTS software