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DeePTB

DeepModeling Build Test

About DeePTB

DeePTB is an innovative Python package that employs deep learning to construct electronic Hamiltonians using a minimal basis Slater-Koster TB(DeePTB-SK), and full LCAO basis using E3-equivariant neural networks for quantum operators including Hamiltonian, overlap, and density matrix (DeePTB-E3). It is designed to:

  • Efficiently predict TB/LCAO Hamiltonians for large, unseen structures based on training with smaller ones.
  • Efficiently predict LCAO-Density matrix and hence charge density as well as the orbital overlap matrix.
  • Enable simulations of large systems under structural perturbations, finite temperature simulations integrating molecular dynamics (MD) for comprehensive atomic and electronic behavior.

For DeePTB-SK:

  • Support customizable Slater-Koster parameterization with neural network incorporation for local environmental corrections.
  • Operate independently of the choice of bases and exchange-correlation functionals, offering flexibility and adaptability.
  • Handle systems with strong spin-orbit coupling (SOC) effects.

For DeePTB-E3:

  • Support constructing DFT Hamiltonians/density and overlap matrices under full LCAO basis.
  • Utilize strictly local and semi-local E3-equivariant neural networks to achieve high data-efficiency and accuracy.
  • Speed up via SO(2)convolution to support LCAO basis containing f and g orbitals.

DeePTB is a versatile tool adaptable for a wide range of materials and phenomena, providing accurate and efficient simulations. See more details in our DeePTB paper: deeptb-sk: arXiv:2307.04638, deeptb-e3: arXiv:2407.06053

Installation

Installing DeePTB is straightforward. We recommend using a virtual environment for dependency management.

Requirements

  • Python 3.8 or later.
  • Torch 1.13.0 or later (PyTorch Installation).
  • ifermi (optional, for 3D fermi-surface plotting).

Installation Steps

Using PyPi

  1. Ensure you have Python 3.8 or later and Torch installed.
  2. Install DeePTB with pip:
    pip install dptb

From Source

  1. Clone the repository:
    git clone https://github.com/deepmodeling/DeePTB.git
  2. Navigate to the root directory and install DeePTB:
    cd DeePTB
    pip install .

Usage

For a comprehensive guide and usage tutorials, visit our documentation website.

Community

DeePTB joins the DeepModeling community, a community devoted of AI for science, as an incubating level project. To learn more about the DeepModeling community, see the introduction of community.

Contributing

We welcome contributions to DeePTB. Please refer to our contributing guidelines for details.

How to Cite

When utilizing the DeePTB package in your research, we request that you cite the following reference:

Gu, Qiangqiang, et al. "DeePTB: A deep learning-based tight-binding approach with ab initio accuracy." arXiv preprint arXiv:2307.04638 (2023).

Full Dependencies

  • python = ">=3.8"
  • pytest = ">=7.2.0"
  • pytest-order = "1.2.0"
  • numpy = "*"
  • scipy = "1.9.1"
  • spglib = "*"
  • matplotlib = "*"
  • torch = ">=1.13.0"
  • ase = "*"
  • pyyaml = "*"
  • future = "*"
  • dargs = "0.4.4"
  • xitorch = "0.3.0"
  • fmm3dpy = "1.0.0"
  • e3nn = ">=0.5.1"
  • torch-runstats = "0.2.0"
  • torch_scatter = "2.1.2"
  • torch_geometric = ">=2.4.0"
  • opt-einsum = "3.3.0"
  • h5py = "3.7.0"
  • lmdb = "1.4.1"
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