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Issues list

Frameshift deletion flanked by introns question Further information is requested
#74 by Percud was closed May 28, 2025
3
brew install miniprot
#73 by ankane was closed May 24, 2025
1
Annotate allotetropolyploid using diploid protein question Further information is requested
#72 by seikot345 was closed May 15, 2025
2
Job Killed question Further information is requested
#71 by drhoads was closed Mar 26, 2025
3
Feature request: protein fasta as additional output file enhancement New feature or request
#70 by aabaricalla was closed Mar 8, 2025
3
Plans to add an API enhancement New feature or request
#69 by gtonkinhill was closed Mar 23, 2025
2
[morecore] insufficient memory question Further information is requested
#68 by HHaoyi was closed Mar 7, 2025
1
Change the GFF3 ID attribute to the original protein name
#67 by kvertacnik was closed Oct 22, 2024
1
Allow to index ORFs from the beginning question Further information is requested
#66 by jfouret was closed Oct 14, 2024
2
Feature Request: --junc-bed, --junc-bonus parameters enhancement New feature or request
#65 by alevar was closed Mar 8, 2025
4
Can this be used as a replacement for MetaEuk's eukaryotic gene prediction capabilities? question Further information is requested
#64 by jolespin was closed Mar 7, 2025
5
Homologous comparison resulted in an empty GFF file.
#63 by GLking123 was closed Aug 5, 2024
Create protein-mRNA-annotator.py
#62 by ghost was closed Apr 17, 2024 Loading…
Create miniprot.py
#61 by ghost was closed Apr 17, 2024 Loading…
Use information from conserved introns enhancement New feature or request
#60 by mparker2 was closed Mar 23, 2025
2
large chromosome alignment may have empty output bug Something isn't working
#59 by huangnengCSU was closed Mar 7, 2025
Inserted internal stop codons are not penalized bug Something isn't working
#58 by Percud was closed Mar 6, 2024
2
Different translation tables enhancement New feature or request
#57 by giacomomutti was closed Mar 6, 2024
7
Pgap 9185 gencode 1
#56 by azat-badretdin was closed Mar 6, 2024 Loading…
3
GFF3 output is malformed for stop_codon features bug Something isn't working
#55 by carsonhh was closed Mar 6, 2024
1
Inconsistent use of operators in the cs tag? question Further information is requested
#54 by Percud was closed Mar 6, 2024
1
A way to prefer closer exons in tandemly duplicated genes on the same strand question Further information is requested
#53 by melop was closed Dec 26, 2023
1
Using miniprot to identify homologous transposable elements?
#52 by BitaoQiu was closed May 3, 2025
fix man page typo
#51 by diekhans was merged Feb 15, 2024 Loading…
Aligning to distant homologues question Further information is requested
#50 by ens-sb was closed Sep 30, 2024
2
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